PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan012901
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 69aa    MW: 7885.02 Da    PI: 11.2735
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55183560PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20655255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a+  a+++l+g
  Aan012901  6 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYAGAARSLRG 55
               7********.**********883....5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.3E-13655IPR001471AP2/ERF domain
SMARTSM003802.3E-30669IPR001471AP2/ERF domain
CDDcd000184.18E-18662No hitNo description
PROSITE profilePS5103220.56663IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-21663IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-29662IPR001471AP2/ERF domain
PRINTSPR003671.6E-11718IPR001471AP2/ERF domain
PRINTSPR003671.6E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MASPNHYRGV RKRPWGRYAA EIRDPWKKTR VWLGTFDTPE EAALAYAGAA RSLRGPKAKT  60
TFLLHHSPH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-20264164ATERF1
3gcc_A6e-20264164ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956367.11e-32PREDICTED: ethylene-responsive transcription factor 12-like
SwissprotQ94ID69e-33ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A103XEY02e-35A0A103XEY0_CYNCS; AP2/ERF domain-containing protein
STRINGVIT_10s0003g00130.t012e-31(Vitis vinifera)
STRINGGSMUA_Achr6P00240_0012e-31(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-27ERF domain protein 12